{
  "_id": "6a41acb14ba05a737d89f8da",
  "Package": "sae4health",
  "Title": "Small Area Estimation for Key Health and Demographic Indicators\nfrom Household Surveys",
  "Version": "1.2.3",
  "Authors@R": "c(\nperson(given = \"Yunhan\", family = \"Wu\", email= \"wu-thomas@outlook.com\", role = c(\"cre\", \"aut\")),\nperson(given = \"Qianyu\", family = \"Dong\", email= \"qdong14@ucsc.edu\", role = \"aut\"),\nperson(given = \"Zehang R\", family = \"Li\", email= \"lizehang@gmail.com\", role = \"aut\"),\nperson(given = \"Jon\", family = \"Wakefield\", email = \"jonno@uw.edu\", role = \"aut\")\n)",
  "Description": "Enables small area estimation (SAE) of health and\ndemographic indicators in low- and middle-income countries\n(LMICs). It powers an R 'shiny' application for generating\nsubnational estimates and prevalence maps of 150+ binary\nindicators from Demographic and Health Surveys (DHS). It builds\non the SAE analysis workflow from the 'surveyPrev' package. For\ndocumentation, visit <https://sae4health.stat.uw.edu/>.\nMethodological details can be found at Wu et al. (2025)\n<doi:10.48550/arXiv.2505.01467>.",
  "License": "AGPL-3",
  "URL": "https://sae4health.stat.uw.edu/,\nhttps://github.com/wu-thomas/sae4health",
  "BugReports": "https://github.com/wu-thomas/sae4health/issues",
  "Additional_repositories": "https://inla.r-inla-download.org/R/testing/",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.3.2",
  "NeedsCompilation": "no",
  "Config/build/clean-inst-doc": "FALSE",
  "Config/testthat/edition": "3",
  "Language": "en-US",
  "Config/pak/sysreqs": "libabsl-dev libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libgdal-dev gdal-bin libgeos-dev make\nlibicu-dev libpng-dev libuv1-dev libxml2-dev libssl-dev\nlibproj-dev libsqlite3-dev libudunits2-dev libx11-dev\nzlib1g-dev",
  "Repository": "https://wu-thomas.r-universe.dev",
  "Date/Publication": "2026-06-28 22:44:47 UTC",
  "RemoteUrl": "https://github.com/wu-thomas/sae4health",
  "RemoteRef": "HEAD",
  "RemoteSha": "be22e132ef837cda38d7c5ce500e0830be370ac8",
  "Packaged": {
    "Date": "2026-06-28 23:17:23 UTC",
    "User": "root"
  },
  "Author": "Yunhan Wu [cre, aut],\nQianyu Dong [aut],\nZehang R Li [aut],\nJon Wakefield [aut]",
  "Maintainer": "Yunhan Wu <wu-thomas@outlook.com>",
  "MD5sum": "9918a455b5f16a8cf5cebcd96dd1f9cd",
  "_user": "wu-thomas",
  "_type": "src",
  "_file": "sae4health_1.2.3.tar.gz",
  "_fileid": "dcfbd749d214192493a62e187c63d65efac21c53d14e6f332cfdd5c948b8cb0e",
  "_filesize": 3927012,
  "_sha256": "dcfbd749d214192493a62e187c63d65efac21c53d14e6f332cfdd5c948b8cb0e",
  "_created": "2026-06-28T23:17:23.000Z",
  "_published": "2026-06-28T23:22:25.314Z",
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 83951065805,
      "time": 215,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7939625075"
    },
    {
      "job": 83951065801,
      "time": 236,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "7939627885"
    },
    {
      "job": 83951065808,
      "time": 162,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "7939618338"
    },
    {
      "job": 83951065802,
      "time": 152,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "7939617331"
    },
    {
      "job": 83950750469,
      "time": 294,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "7939598917"
    },
    {
      "job": 83951065806,
      "time": 247,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7939629230"
    },
    {
      "job": 83951065827,
      "time": 168,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7939619237"
    },
    {
      "job": 83951065815,
      "time": 164,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "7939618726"
    },
    {
      "job": 83951065831,
      "time": 180,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "7939620737"
    }
  ],
  "_buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/wu-thomas/sae4health",
  "_commit": {
    "id": "be22e132ef837cda38d7c5ce500e0830be370ac8",
    "author": "Victoria Knutson <vknuts@uw.edu>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #24 from victoriaknutson/main\n\nReviewer changes on prevalence mapping labels",
    "time": 1782686687
  },
  "_maintainer": {
    "name": "Yunhan Wu",
    "email": "wu-thomas@outlook.com",
    "login": "wu-thomas",
    "description": "",
    "uuid": 23563403
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.3",
      "role": "Depends"
    },
    {
      "package": "config",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "DT",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "golem",
      "version": ">= 0.4.1",
      "role": "Imports"
    },
    {
      "package": "grid",
      "role": "Imports"
    },
    {
      "package": "gridExtra",
      "role": "Imports"
    },
    {
      "package": "htmltools",
      "role": "Imports"
    },
    {
      "package": "htmlwidgets",
      "role": "Imports"
    },
    {
      "package": "leaflet",
      "role": "Imports"
    },
    {
      "package": "R6",
      "role": "Imports"
    },
    {
      "package": "sf",
      "role": "Imports"
    },
    {
      "package": "sp",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "version": ">= 1.7.4",
      "role": "Imports"
    },
    {
      "package": "shinyBS",
      "role": "Imports"
    },
    {
      "package": "shinydashboard",
      "role": "Imports"
    },
    {
      "package": "shinyFeedback",
      "role": "Imports"
    },
    {
      "package": "shinyjs",
      "role": "Imports"
    },
    {
      "package": "shinyWidgets",
      "role": "Imports"
    },
    {
      "package": "SUMMER",
      "role": "Imports"
    },
    {
      "package": "surveyPrev",
      "role": "Imports"
    },
    {
      "package": "survey",
      "role": "Imports"
    },
    {
      "package": "geodata",
      "role": "Imports"
    },
    {
      "package": "bookdown",
      "role": "Imports"
    },
    {
      "package": "markdown",
      "role": "Imports"
    },
    {
      "package": "haven",
      "role": "Imports"
    },
    {
      "package": "ggridges",
      "role": "Imports"
    },
    {
      "package": "ggthemes",
      "role": "Imports"
    },
    {
      "package": "RColorBrewer",
      "role": "Imports"
    },
    {
      "package": "viridisLite",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "patchwork",
      "role": "Imports"
    },
    {
      "package": "leaflegend",
      "role": "Imports"
    },
    {
      "package": "leafsync",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "plotly",
      "role": "Imports"
    },
    {
      "package": "readr",
      "role": "Imports"
    },
    {
      "package": "sn",
      "role": "Imports"
    },
    {
      "package": "INLA",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "wu-thomas",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-40",
      "n": 2
    },
    {
      "week": "2025-42",
      "n": 1
    },
    {
      "week": "2025-45",
      "n": 3
    },
    {
      "week": "2025-46",
      "n": 2
    },
    {
      "week": "2025-50",
      "n": 2
    },
    {
      "week": "2026-03",
      "n": 1
    },
    {
      "week": "2026-04",
      "n": 1
    },
    {
      "week": "2026-12",
      "n": 1
    },
    {
      "week": "2026-13",
      "n": 1
    },
    {
      "week": "2026-16",
      "n": 1
    },
    {
      "week": "2026-17",
      "n": 2
    },
    {
      "week": "2026-19",
      "n": 3
    },
    {
      "week": "2026-20",
      "n": 5
    },
    {
      "week": "2026-25",
      "n": 1
    },
    {
      "week": "2026-26",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 2,
  "_contributors": [
    {
      "user": "victoriaknutson",
      "count": 42,
      "uuid": 59446803
    },
    {
      "user": "jieyixu",
      "count": 20,
      "uuid": 184208997
    },
    {
      "user": "wu-thomas",
      "count": 17,
      "uuid": 23563403
    },
    {
      "user": "lucyxuu",
      "count": 15,
      "uuid": 91922817
    },
    {
      "user": "asa1",
      "count": 7,
      "uuid": 1946578
    },
    {
      "user": "richardli",
      "count": 4,
      "uuid": 2946093
    },
    {
      "user": "asas-uw",
      "count": 1,
      "uuid": 158503582
    }
  ],
  "_userbio": {
    "uuid": 23563403,
    "type": "user",
    "name": "wu-thomas",
    "followers": 4
  },
  "_downloads": {
    "count": 602,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/sae4health"
  },
  "_devurl": "https://github.com/wu-thomas/sae4health",
  "_searchresults": 12,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/sae4health.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/wu-thomas/sae4health",
  "_realowner": "wu-thomas",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.2.0",
      "date": "2025-03-28"
    },
    {
      "version": "1.2.1",
      "date": "2025-04-01"
    },
    {
      "version": "1.2.2",
      "date": "2025-04-25"
    },
    {
      "version": "1.2.3",
      "date": "2025-05-07"
    }
  ],
  "_exports": [
    "admin_to_num",
    "num_to_admin",
    "run_app"
  ],
  "_datasets": [
    {
      "name": "adm2.link.all",
      "title": "WHO Administrative Level 2 Linkage",
      "object": "WHO_shp_linkage",
      "class": [
        "data.frame"
      ],
      "fields": [
        "WHO_REGION",
        "ISO.3.DIGIT.COUNTRY.CODE",
        "ADM0_VIZ_NAME",
        "ADM1_VIZ_NAME",
        "ADM2_VIZ_NAME",
        "GUID.LEVEL.0",
        "GUID.LEVEL.1..",
        "GLOBAL.UNIQUE.IDENTIFIER.."
      ],
      "rows": 1095,
      "table": true,
      "tojson": true
    },
    {
      "name": "DHS_ind_dictionary",
      "title": "DHS Indicator Dictionary",
      "object": "DHS_ind_dictionary",
      "class": [
        "data.frame"
      ],
      "fields": [
        "DHS Standard Indicator ID",
        "Label",
        "Full Definition",
        "Denominator",
        "Measurement Type"
      ],
      "rows": 4433,
      "table": true,
      "tojson": true
    },
    {
      "name": "natl.WHO.shp",
      "title": "WHO National-Level Shapefile",
      "object": "natl_WHO_shp",
      "class": [
        "sf",
        "data.frame"
      ],
      "fields": [
        "WHO_REGION",
        "ISO_2_CODE",
        "ADM0_NAME",
        "ADM0_CODE",
        "STARTDATE",
        "ENDDATE",
        "GUID",
        "ISO_3_CODE",
        "WHO_CODE",
        "ADM0_SOVRN",
        "ADM0_ALTID",
        "LVL",
        "WHO_STATUS",
        "UN_CODE",
        "UNICEF_REG",
        "CENTER_LON",
        "CENTER_LAT",
        "GlobalID",
        "NOTES",
        "ADM0_VIZ_N",
        "ARABIC",
        "SPANISH",
        "FRENCH",
        "RUSSIAN",
        "CHINESE",
        "WORLD_BANK",
        "WORLD_BA_1",
        "PLACE_ID",
        "WORLD_CONT",
        "ADM0_SHAPE",
        "ADM0_PCODE",
        "CODE",
        "NIC_YN",
        "Field",
        "geometry"
      ],
      "rows": 8,
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "sae4health-package",
      "title": "R Shiny App for Small Area Estimation of Health and Demographic Indicators",
      "topics": [
        "sae4health-package",
        "sae4health"
      ]
    },
    {
      "page": "adm2.link.all",
      "title": "WHO Administrative Level 2 Linkage",
      "topics": [
        "adm2.link.all"
      ]
    },
    {
      "page": "admin_to_num",
      "title": "Convert Administrative Level String to Numeric Code",
      "topics": [
        "admin_to_num"
      ]
    },
    {
      "page": "DHS_api_est",
      "title": "DHS API Estimates",
      "topics": [
        "DHS_api_est"
      ]
    },
    {
      "page": "DHS_ind_dictionary",
      "title": "DHS Indicator Dictionary",
      "topics": [
        "DHS_ind_dictionary"
      ]
    },
    {
      "page": "DHS.country.meta",
      "title": "DHS Country Metadata",
      "topics": [
        "DHS.country.meta"
      ]
    },
    {
      "page": "DHS.dataset.meta",
      "title": "DHS Dataset Metadata",
      "topics": [
        "DHS.dataset.meta"
      ]
    },
    {
      "page": "DHS.survey.meta",
      "title": "DHS Survey Metadata",
      "topics": [
        "DHS.survey.meta"
      ]
    },
    {
      "page": "match_all_result",
      "title": "Matching Results Between DHS and GitHub Indicators, Imported from surveyPrev",
      "topics": [
        "match_all_result"
      ]
    },
    {
      "page": "natl.WHO.shp",
      "title": "WHO National-Level Shapefile",
      "topics": [
        "natl.WHO.shp"
      ]
    },
    {
      "page": "num_to_admin",
      "title": "Convert Numeric Code to Administrative Level String",
      "topics": [
        "num_to_admin"
      ]
    },
    {
      "page": "ref_tab_22",
      "title": "Reference Table for Original 22 Indicators",
      "topics": [
        "ref_tab_22"
      ]
    },
    {
      "page": "ref_tab_all",
      "title": "Combined Indicators Reference Table",
      "topics": [
        "ref_tab_all"
      ]
    },
    {
      "page": "ref_tab_new",
      "title": "Newly Added Indicators Reference Table",
      "topics": [
        "ref_tab_new"
      ]
    },
    {
      "page": "run_app",
      "title": "Run the Shiny Application",
      "topics": [
        "run_app"
      ]
    }
  ],
  "_readme": "https://github.com/wu-thomas/sae4health/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "attempt",
    "backports",
    "base64enc",
    "bit",
    "bit64",
    "bookdown",
    "boot",
    "brio",
    "bslib",
    "cachem",
    "checkmate",
    "class",
    "classInt",
    "cli",
    "clipr",
    "codetools",
    "commonmark",
    "config",
    "cpp11",
    "crayon",
    "crosstalk",
    "curl",
    "data.table",
    "datawizard",
    "DBI",
    "deldir",
    "digest",
    "dotCall64",
    "dplyr",
    "DT",
    "e1071",
    "evaluate",
    "expss",
    "farver",
    "fastmap",
    "fields",
    "fontawesome",
    "fontBitstreamVera",
    "fontLiberation",
    "fontquiver",
    "forcats",
    "foreign",
    "fs",
    "gdtools",
    "generics",
    "geodata",
    "getPass",
    "ggiraph",
    "ggplot2",
    "ggridges",
    "ggthemes",
    "glue",
    "golem",
    "gridExtra",
    "gtable",
    "haven",
    "highr",
    "hms",
    "htmlTable",
    "htmltools",
    "htmlwidgets",
    "httpuv",
    "httr",
    "insight",
    "iotools",
    "isoband",
    "jquerylib",
    "jsonlite",
    "KernSmooth",
    "knitr",
    "labeling",
    "labelled",
    "later",
    "lattice",
    "lazyeval",
    "leaflegend",
    "leaflet",
    "leaflet.providers",
    "leafsync",
    "lifecycle",
    "litedown",
    "maditr",
    "magrittr",
    "maps",
    "markdown",
    "MASS",
    "Matrix",
    "MatrixModels",
    "matrixStats",
    "memoise",
    "mime",
    "minqa",
    "mitools",
    "mnormt",
    "naniar",
    "norm",
    "numDeriv",
    "openssl",
    "otel",
    "patchwork",
    "pillar",
    "pkgconfig",
    "plotly",
    "plyr",
    "png",
    "prettyunits",
    "progress",
    "promises",
    "proxy",
    "purrr",
    "qdapRegex",
    "quantreg",
    "R6",
    "rappdirs",
    "raster",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "rdhs",
    "readr",
    "reshape2",
    "rlang",
    "rmarkdown",
    "rstudioapi",
    "s2",
    "S7",
    "sass",
    "scales",
    "sf",
    "shadowtext",
    "shiny",
    "shinyBS",
    "shinydashboard",
    "shinyFeedback",
    "shinyjs",
    "shinyWidgets",
    "sjlabelled",
    "sn",
    "sourcetools",
    "sp",
    "spam",
    "SparseM",
    "spData",
    "spdep",
    "storr",
    "stringi",
    "stringr",
    "SUMMER",
    "survey",
    "surveyPrev",
    "survival",
    "sys",
    "systemfonts",
    "terra",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "tzdb",
    "units",
    "UpSetR",
    "utf8",
    "vctrs",
    "viridis",
    "viridisLite",
    "visdat",
    "vroom",
    "withr",
    "wk",
    "xfun",
    "xml2",
    "xtable",
    "yaml"
  ],
  "_score": 5.03342375548695,
  "_indexed": true,
  "_nocasepkg": "sae4health",
  "_universes": [
    "wu-thomas"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.2.3",
      "date": "2026-06-28T23:20:37.000Z",
      "distro": "resolute",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "ba1d3b82689c564b35a44088056c3e66393b2952965ecfa6e6c94cf470967acf",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.2.3",
      "date": "2026-06-28T23:20:57.000Z",
      "distro": "resolute",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "4492db73cc9f5f5ec36496e373d59c8e4dab8ebc52c47c98d96691e2e93f8069",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.2.3",
      "date": "2026-06-28T23:20:03.000Z",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "9e478398194dbb7437c23a73126c0778b3584ffdf350e7d357692f236907443c",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.2.3",
      "date": "2026-06-28T23:19:53.000Z",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "20a76035e1a92852584ab74c2947ed7555e1408a00f8ec8f9372af487ba669c3",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.2.3",
      "date": "2026-06-28T23:21:56.000Z",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "76da1df2134666eda6557f6218625e79ea666d495ab407e2a911f13b09a359d1",
      "status": "success",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.2.3",
      "date": "2026-06-28T23:19:38.000Z",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "6a304fc97b6d4e12e7ea2597d92b2330fc4ec98c23306b613a164d65f0f6732a",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.2.3",
      "date": "2026-06-28T23:19:33.000Z",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "1385cbd1b6870d425d61f57fa7c5a34b7132ddcd41284dad13e60301c207963d",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.2.3",
      "date": "2026-06-28T23:19:50.000Z",
      "commit": "be22e132ef837cda38d7c5ce500e0830be370ac8",
      "fileid": "76e7301139562e24a8898d1f66b11b44197f9db053a3d114fa3f8d0c0fec2a5c",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/wu-thomas/actions/runs/28339265777"
    }
  ]
}